:78 Function create_function() is deprecated [8192]
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diff --git a/README b/README index fa2f6b6..38f9bce 100644 --- a/README +++ b/README @@ -544,7 +544,7 @@ IV.iv) Full analysis of Oxytricha trifallax PATHtoRACSrepo/datasets/get_OXYchIPseq-files.sh # 3) determination of ORFs with RACS - PATHtoRACSrepo/core/countReads.sh SRX483016_1.fastq.gz SRX483017_1.fastq.gz Oxytricha_trifallax_022112_assembly.fasta Oxytricha_trifallax_022112.gff3 /dev/shm/ 16 PATHtoRACSrepo/core/defns/OXY_gene.idf + PATHtoRACSrepo/core/countReads.sh SRX483016_1.fastq.gz SRX483017_1.fastq.gz Oxytricha_trifallax_022112_assembly.fasta Oxytricha_trifallax_022112.gff3 /dev/shm/ 16 PATHtoRACSrepo/core/defns/OXY_gene.id # 4) determination of the IGRs # 4.i) first, cd into the ORF_... directory generated by the previous step where the results from the ORF part of the RACS pipeline were placed