:78 Function create_function() is deprecated [8192]
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diff --git a/README b/README index 280c54e..085a12f 100644 --- a/README +++ b/README @@ -3,6 +3,9 @@ RACS: Rapid Analysis of ChIP-Seq data for contig based genomes These tools are a serie of scripts developed to facilitate the analysis of ChIP-Seq data and has been applied to the organism T. Thermophila. + +* Requirements + The scripts should work in any Linux-type OS (ie. Mac OS and Linux OS). It requires to have installed the following programs: - SAMtools @@ -12,6 +15,7 @@ It requires to have installed the following programs: The first two are needed for the determination of reads in open region frames -ORF- (genic regions). While SAMtools and R are needed for the determination of intergenic regions -IGR-. + The main scripts are located in the "core" directory. Additionally we provide other subdirectories containing the following: - "hpc": submission scripts for typical job managers and schedulers in HPC environments