:78 Function create_function() is deprecated [8192]
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tools/racs_monitor.sh |
diff --git a/tools/racs_monitor.sh b/tools/racs_monitor.sh new file mode 100644 index 0000000..44a8802 --- /dev/null +++ b/tools/racs_monitor.sh @@ -0,0 +1,37 @@ +#!/bin/bash + +# auxiliary script to monitor RAMdisk and memory utilization +# +# This script is part of +# RACS v1.0 (2018/2019) -- Open source tools for Analizing ChIP-Seq data +# +########### + + +# RAMdisk location +ramdisk="/dev/shm" +RACSdir="ORF_RACS-" + +# set location to inspect +location="${ramdisk}/${USER}/${RACSdir}*" + +# Commands +# check for files generated in the specified location +cmd1="ls -l $location " +# check for memory utilization +cmd2="free -g " +# check for +cmd3="du -s -h $location " +# separator for separating commands +separator="echo -----------" +# message +msg="echo Press 'CTRL-C' to exit the monitoring tool..." + +# combine commmands +obs="$cmd1 ; $separator ; $cmd2 ; $separator ; $cmd3 ; $separator ; $msg" + +# for testing purposes +obs="echo '*-*'$obs'-*-' ; $obs" + +# observe... +watch $test