:78 Function create_function() is deprecated [8192]
diff --git a/tools/check_RACS_processes.sh b/tools/check_RACS_processes.sh new file mode 100755 index 0000000..48ec735 --- /dev/null +++ b/tools/check_RACS_processes.sh @@ -0,0 +1,38 @@ +#!/bin/bash + +# utility script to check for running RACS' processes +# +# Usage: +# pathTOracs/tools/check_RACS_processes.sh +# +# This script is part of +# RACS v1.0 (2018/2019) -- Open source tools for Rapid Analisys of ChIP-Seq data +# +########### + +####################################################### +# check that the script is not being sourced!!! +if [[ $0 == '-bash' ]]; then + echo "Please do not 'source' this script; ie. run it as PATHtoRACS/core/SCRIPTname" + return +fi + +# setting preamble, detecting scripts location +scriptDIR=`dirname $0` +# get the absolute path of RACS... +scriptsDIR=$( cd "${scriptDIR}" && pwd ) +####################################################### + + +# check for RACS keyword +ps aux -U $USER | grep -i RACS | grep -v "grep" + + +# check for any of the possible scripts of the RACS pipeline... +possible_scripts=`cat $scriptsDIR/../core/test/lst` + +for i in ${possible_scripts}; do + #echo $i; echo `basename $i`; + ps aux -U $USER | grep -i $i | grep -v "grep" ; + ps aux -U $USER | grep -i `basename $i` | grep -v "grep"; +done diff --git a/tools/ibdX.pdf b/tools/ibdX.pdf deleted file mode 100644 index 7f2a4d2..0000000 Binary files a/tools/ibdX.pdf and /dev/null differ