:78 Function create_function() is deprecated [8192]
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plottingTools.R |
diff --git a/plottingTools.R b/plottingTools.R index 02603b0..264af76 100644 --- a/plottingTools.R +++ b/plottingTools.R @@ -6,12 +6,40 @@ # containing the sample sizes and probabilities values # function to generate a semi-log plot of two vectors with connecting lines -plotMC <- function(NS,probs) { +plotMC <- function(NS,probs, wHist=T) { + # obtain lenght of vectors + lNS <- length(NS) + lprobs <- length(probs) + # check that the arguments have matching dimensions - if (length(NS)!=length(probs)) { - stop("The function requires two vectors with the same number of eleemnts!") + if (lNS != lprobs) { + stop("This function requires two vectors with the same number of elements!") } + # set up figure canvas + par(fig = c(0,1,0,1)) + # semi-log plot of probs vs NS with connecting lines plot(log(NS),probs,'b') + + # determine values to consider for computing convergent prob. + i0 <- 2*lprobs/3 + i1 <- lprobs + convP <- mean(probs[i0:i1]) + # add line to display convergent value of P + abline(v=0,h=convP, col='red', lw=2, lt=2) + + # add inset figure with a histogram + if (wHist) { + # figure out where to place inset + if ( (convP-probs[1]) < 0 ) { + # mean below 1st value, inset above + par(fig = c(0.47,1, 0.5, 1), new = T) + } else { + # mean above 1st value, inset below + par(fig = c(0.47,1, 0.07, 0.5), new = T) + } + hist(probs, col='grey') + } + }